Directory: Top/Science/Biology/Biochemistry_and_Molecular_Biology/Biomolecules/Proteins_and

Top / Science / Biology / Biochemistry_and_Molecular_Biology / Biomolecules / Proteins_and_Enzymes / Structure /

Topology of Protein Structure
Provides articles and FAQ explaining cartoon depictions, atlas of tertiary arrangements of polypeptides within predicted crystal. Includes server for upload of PDB code, and software downloads from University of Leeds, UK.
http://www.tops.leeds.ac.uk/
Leeds.ac.uk ~ Site Info Whois Trace Route RBL Check

Structural Classification of Proteins
A key for different proteins based on structural features, with keyword search and PDB data, and an entry viewer for download.
http://scop.mrc-lmb.cam.ac.uk/scop/
Cam.ac.uk ~ Site Info Whois Trace Route RBL Check

Atlas of Protein Side-Chain Interactions
Modeling the packing of all 20 amino acid side-chains with one-another and with DNA - from Birkbeck and University Colleges, London.
http://www.biochem.ucl.ac.uk/bsm/sidechains/
Ucl.ac.uk ~ Site Info Whois Trace Route RBL Check

Protein Data Bank
PDB provides a text based format for archiving experimentally-determined, three dimensional structures, at the Brookhaven National Laboratory, with list of mirror sites worldwide.
http://www.rcsb.org/pdb/
Rcsb.org ~ Site Info Whois Trace Route RBL Check

Principles of Protein Structure
Archive of online course, with discussion lists, and summary of lecture notes from 1996 at Birkbeck, University of London, UK.
http://www.cryst.bbk.ac.uk/PPS2/
Bbk.ac.uk ~ Site Info Whois Trace Route RBL Check

Protein Structure Initiative
Large scale attempt to determine topology, through collaborative internet based effort, maintained by Millennium Information, Inc., Cambridge, MA.
http://www.structuralgenomics.org/
Structuralgenomics.org ~ Site Info Whois Trace Route RBL Check

Protein Structure Prediction Center
Advances and archive of meetings on critical assessment of 3D determination from sequence using alignment tools. Maintained at Lawrence Livermore National Laboratory, California.
http://predictioncenter.llnl.gov/
Llnl.gov ~ Site Info Whois Trace Route RBL Check

Macromolecular Structure Database
Resource for the deposition and validation of newly proposed structures, maintained by research group, within the European Bioinformatics Institute, Hinxton, UK.
http://www.ebi.ac.uk/msd/
Ebi.ac.uk ~ Site Info Whois Trace Route RBL Check

Histone Sequence Database
Compendium of histone protein sequence alignments, including postranslational modifications and proteins containing the histone fold, at the National Human Genome Research Institute, Bethesda, MD.
http://genome.nhgri.nih.gov/histones/
Nih.gov ~ Site Info Whois Trace Route RBL Check

Hydrogen Exchange Mass Spectrometry
Analysis of proteins and protein dynamics with hydrogen exchange and mass spectrometry from Corrales, NM.
http://www.hxms.com/hxms.htm
Hxms.com ~ Site Info Whois Trace Route RBL Check